STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
trwDTrwD protein; Part of the Type IV secretion system. Belongs to the GSP E family. (353 aa)    
Predicted Functional Partners:
trwF
TrwF protein.
 
   
 0.956
trwG
TrwG protein.
 
     0.940
trwE
TrwE protein.
 
   
 0.940
vblB11
VblB11 protein.
  
  
 
0.916
virB11
VirB11 protein.
  
  
 
0.914
trwM
TrwM protein.
 
   
 0.846
trwK
TrwK protein.
 
   
 0.792
trwH4
TrwH4 protein.
       0.775
vblB4
VblB4 protein.
 
   
 0.763
virB4
VirB4 protein.
 
   
 0.760
Your Current Organism:
Bartonella grahamii
NCBI taxonomy Id: 634504
Other names: B. grahamii as4aup, Bartonella grahamii as4aup, Bartonella grahamii str. as4aup, Bartonella grahamii strain as4aup
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.