STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bgr_19730Two-component response regulator. (226 aa)    
Predicted Functional Partners:
Bgr_11910
Sensor histidine kinase.
  
 
 0.983
Bgr_03940
Sensory box histidine kinase.
 
 
 0.909
Bgr_00290
Sensor histidine kinase protein.
 
 
 0.881
Bgr_05640
Two-component sensor histidine kinase.
 
 
 0.875
batS
Two-component sensor histidine kinase BatS.
 
 
 0.824
Bgr_05190
Sensor histidine kinase.
 
 0.778
envZ
Sensor histidine kinase EnvZ.
 
 
 0.759
feuQ
Sensor histidine kinase.
 
 
 0.680
Bgr_04780
Sensor diguanylate cyclase/phosphodiesterase.
  
 
 0.676
ntrY
Nitrogen regulation protein NtrY.
 
 
 
 0.666
Your Current Organism:
Bartonella grahamii
NCBI taxonomy Id: 634504
Other names: B. grahamii as4aup, Bartonella grahamii as4aup, Bartonella grahamii str. as4aup, Bartonella grahamii strain as4aup
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.