Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SJZ49295.1 | SJZ73041.1 | SAMN04488128_101459 | SAMN04488128_1011375 | Rhamnogalacturonyl hydrolase YesR. | Glycosyl Hydrolase Family 88. | 0.505 |
SJZ49295.1 | kduI | SAMN04488128_101459 | SAMN04488128_102139 | Rhamnogalacturonyl hydrolase YesR. | 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase; Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate. Belongs to the KduI family. | 0.465 |
SJZ72902.1 | SJZ72939.1 | SAMN04488128_1011370 | SAMN04488128_1011371 | Chondroitin AC lyase. | Ligand-binding sensor domain-containing protein. | 0.560 |
SJZ72902.1 | SJZ72997.1 | SAMN04488128_1011370 | SAMN04488128_1011373 | Chondroitin AC lyase. | Starch-binding associating with outer membrane. | 0.523 |
SJZ72902.1 | SJZ73041.1 | SAMN04488128_1011370 | SAMN04488128_1011375 | Chondroitin AC lyase. | Glycosyl Hydrolase Family 88. | 0.608 |
SJZ72902.1 | SJZ97973.1 | SAMN04488128_1011370 | SAMN04488128_102134 | Chondroitin AC lyase. | Hypothetical protein. | 0.411 |
SJZ72939.1 | SJZ72902.1 | SAMN04488128_1011371 | SAMN04488128_1011370 | Ligand-binding sensor domain-containing protein. | Chondroitin AC lyase. | 0.560 |
SJZ72939.1 | SJZ72968.1 | SAMN04488128_1011371 | SAMN04488128_1011372 | Ligand-binding sensor domain-containing protein. | TonB-linked outer membrane protein, SusC/RagA family. | 0.538 |
SJZ72939.1 | SJZ72997.1 | SAMN04488128_1011371 | SAMN04488128_1011373 | Ligand-binding sensor domain-containing protein. | Starch-binding associating with outer membrane. | 0.539 |
SJZ72939.1 | SJZ73024.1 | SAMN04488128_1011371 | SAMN04488128_1011374 | Ligand-binding sensor domain-containing protein. | Protein of unknown function. | 0.412 |
SJZ72939.1 | SJZ73041.1 | SAMN04488128_1011371 | SAMN04488128_1011375 | Ligand-binding sensor domain-containing protein. | Glycosyl Hydrolase Family 88. | 0.540 |
SJZ72968.1 | SJZ72939.1 | SAMN04488128_1011372 | SAMN04488128_1011371 | TonB-linked outer membrane protein, SusC/RagA family. | Ligand-binding sensor domain-containing protein. | 0.538 |
SJZ72968.1 | SJZ72997.1 | SAMN04488128_1011372 | SAMN04488128_1011373 | TonB-linked outer membrane protein, SusC/RagA family. | Starch-binding associating with outer membrane. | 0.959 |
SJZ72968.1 | SJZ73024.1 | SAMN04488128_1011372 | SAMN04488128_1011374 | TonB-linked outer membrane protein, SusC/RagA family. | Protein of unknown function. | 0.723 |
SJZ72968.1 | SJZ73041.1 | SAMN04488128_1011372 | SAMN04488128_1011375 | TonB-linked outer membrane protein, SusC/RagA family. | Glycosyl Hydrolase Family 88. | 0.761 |
SJZ72968.1 | SJZ73062.1 | SAMN04488128_1011372 | SAMN04488128_1011376 | TonB-linked outer membrane protein, SusC/RagA family. | Hypothetical protein. | 0.455 |
SJZ72997.1 | SJZ72902.1 | SAMN04488128_1011373 | SAMN04488128_1011370 | Starch-binding associating with outer membrane. | Chondroitin AC lyase. | 0.523 |
SJZ72997.1 | SJZ72939.1 | SAMN04488128_1011373 | SAMN04488128_1011371 | Starch-binding associating with outer membrane. | Ligand-binding sensor domain-containing protein. | 0.539 |
SJZ72997.1 | SJZ72968.1 | SAMN04488128_1011373 | SAMN04488128_1011372 | Starch-binding associating with outer membrane. | TonB-linked outer membrane protein, SusC/RagA family. | 0.959 |
SJZ72997.1 | SJZ73024.1 | SAMN04488128_1011373 | SAMN04488128_1011374 | Starch-binding associating with outer membrane. | Protein of unknown function. | 0.723 |
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