Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SJZ55473.1 | SKA03178.1 | SAMN04488128_101702 | SAMN04488128_102376 | Orotidine-5'-phosphate decarboxylase. | Dihydroorotase. | 0.877 |
SJZ55473.1 | SKA15057.1 | SAMN04488128_101702 | SAMN04488128_1021118 | Orotidine-5'-phosphate decarboxylase. | Amidophosphoribosyltransferase. | 0.671 |
SJZ55473.1 | SKA18345.1 | SAMN04488128_101702 | SAMN04488128_1021406 | Orotidine-5'-phosphate decarboxylase. | Carbamoyl-phosphate synthase large subunit. | 0.919 |
SJZ55473.1 | SKA31630.1 | SAMN04488128_101702 | SAMN04488128_103513 | Orotidine-5'-phosphate decarboxylase. | Dihydroorotase. | 0.860 |
SJZ55473.1 | carA | SAMN04488128_101702 | SAMN04488128_101294 | Orotidine-5'-phosphate decarboxylase. | Carbamoyl-phosphate synthase small subunit; Belongs to the CarA family. | 0.924 |
SJZ55473.1 | pyrB | SAMN04488128_101702 | SAMN04488128_10692 | Orotidine-5'-phosphate decarboxylase. | Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. | 0.906 |
SJZ55473.1 | pyrD | SAMN04488128_101702 | SAMN04488128_102461 | Orotidine-5'-phosphate decarboxylase. | Dihydroorotate oxidase A; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily. | 0.952 |
SJZ55473.1 | pyrE | SAMN04488128_101702 | SAMN04488128_1011274 | Orotidine-5'-phosphate decarboxylase. | Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP). | 0.983 |
SKA03178.1 | SJZ55473.1 | SAMN04488128_102376 | SAMN04488128_101702 | Dihydroorotase. | Orotidine-5'-phosphate decarboxylase. | 0.877 |
SKA03178.1 | SKA15057.1 | SAMN04488128_102376 | SAMN04488128_1021118 | Dihydroorotase. | Amidophosphoribosyltransferase. | 0.490 |
SKA03178.1 | SKA18345.1 | SAMN04488128_102376 | SAMN04488128_1021406 | Dihydroorotase. | Carbamoyl-phosphate synthase large subunit. | 0.990 |
SKA03178.1 | SKA31630.1 | SAMN04488128_102376 | SAMN04488128_103513 | Dihydroorotase. | Dihydroorotase. | 0.873 |
SKA03178.1 | carA | SAMN04488128_102376 | SAMN04488128_101294 | Dihydroorotase. | Carbamoyl-phosphate synthase small subunit; Belongs to the CarA family. | 0.989 |
SKA03178.1 | pyrB | SAMN04488128_102376 | SAMN04488128_10692 | Dihydroorotase. | Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. | 0.999 |
SKA03178.1 | pyrD | SAMN04488128_102376 | SAMN04488128_102461 | Dihydroorotase. | Dihydroorotate oxidase A; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily. | 0.976 |
SKA03178.1 | pyrE | SAMN04488128_102376 | SAMN04488128_1011274 | Dihydroorotase. | Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP). | 0.938 |
SKA15057.1 | SJZ55473.1 | SAMN04488128_1021118 | SAMN04488128_101702 | Amidophosphoribosyltransferase. | Orotidine-5'-phosphate decarboxylase. | 0.671 |
SKA15057.1 | SKA03178.1 | SAMN04488128_1021118 | SAMN04488128_102376 | Amidophosphoribosyltransferase. | Dihydroorotase. | 0.490 |
SKA15057.1 | SKA18345.1 | SAMN04488128_1021118 | SAMN04488128_1021406 | Amidophosphoribosyltransferase. | Carbamoyl-phosphate synthase large subunit. | 0.977 |
SKA15057.1 | SKA31630.1 | SAMN04488128_1021118 | SAMN04488128_103513 | Amidophosphoribosyltransferase. | Dihydroorotase. | 0.450 |
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