STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SJZ40494.1AhpC/TSA family protein. (452 aa)    
Predicted Functional Partners:
SKA30685.1
Cupin domain-containing protein.
  
     0.601
SJZ40507.1
HTH domain-containing protein.
 
     0.514
SKA32415.1
DNA-binding transcriptional regulator, AcrR family.
  
     0.485
SKA41490.1
Thioredoxin-like domain-containing protein.
  
     0.456
SKA45797.1
DNA-binding transcriptional regulator, AcrR family.
  
     0.445
SJZ59260.1
Hypothetical protein.
  
     0.439
SKA36277.1
Thioredoxin-like domain-containing protein.
  
     0.436
SKA33475.1
DGQHR domain-containing protein.
  
     0.415
Your Current Organism:
Chitinophaga eiseniae
NCBI taxonomy Id: 634771
Other names: C. eiseniae, Chitinophaga eiseniae Yasir et al. 2011, Chitinophaga sp. YC6729, DSM 22224, KACC 13774, strain YC6729
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.