STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SJZ57741.1Protein of unknown function. (211 aa)    
Predicted Functional Partners:
SJZ57778.1
2OG-Fe(II) oxygenase superfamily protein.
 
     0.922
SJZ57728.1
8-oxo-dGTP diphosphatase.
       0.786
SKA04073.1
O-acetyl-ADP-ribose deacetylase (regulator of RNase III), contains Macro domain.
 
     0.744
SJZ57831.1
Serine/threonine protein phosphatase 1.
       0.738
SKA43723.1
Hypothetical protein.
 
     0.722
SJZ57712.1
TonB dependent receptor.
       0.566
SJZ57690.1
TonB-dependent Receptor Plug Domain.
       0.532
SKA37678.1
RNA ligase, Rnl2 family.
  
     0.532
SKA36456.1
Hypothetical protein.
  
     0.528
SKA43717.1
TIGR02452 family protein.
 
     0.524
Your Current Organism:
Chitinophaga eiseniae
NCBI taxonomy Id: 634771
Other names: C. eiseniae, Chitinophaga eiseniae Yasir et al. 2011, Chitinophaga sp. YC6729, DSM 22224, KACC 13774, strain YC6729
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.