STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKA14804.1Uncharacterized conserved protein, DUF1330 family. (98 aa)    
Predicted Functional Partners:
SKA14790.1
Uncharacterized damage-inducible protein DinB (forms a four-helix bundle).
       0.768
SJZ67632.1
Protein of unknown function.
  
     0.625
SKA36101.1
Ferritin-like.
  
     0.603
SJZ39867.1
Hypothetical protein.
  
     0.553
SKA14777.1
Helix-turn-helix domain-containing protein.
       0.548
SJZ39483.1
WGR domain-containing protein, predicted DNA-binding domain in MolR.
  
     0.534
SKA46252.1
Gliding motility-associated C-terminal domain-containing protein.
  
     0.495
SKA31576.1
Dimethylhistidine N-methyltransferase.
   
    0.482
SKA45995.1
Right handed beta helix region.
  
     0.470
SKA29907.1
Phage portal protein, HK97 family.
  
     0.457
Your Current Organism:
Chitinophaga eiseniae
NCBI taxonomy Id: 634771
Other names: C. eiseniae, Chitinophaga eiseniae Yasir et al. 2011, Chitinophaga sp. YC6729, DSM 22224, KACC 13774, strain YC6729
Server load: low (26%) [HD]