STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SJZ95988.1Hypothetical protein. (304 aa)    
Predicted Functional Partners:
SJZ95925.1
DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains.
 
     0.834
SJZ95947.1
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
 
     0.834
SJZ47778.1
Tetratricopeptide repeat-containing protein.
  
     0.664
SKA36197.1
Regulatory protein, luxR family.
  
     0.624
SKA33346.1
Uncharacterized membrane protein.
  
     0.588
SKA29067.1
Uncharacterized membrane protein.
  
     0.548
SKA31051.1
Uncharacterized membrane protein.
  
     0.524
SJZ95510.1
Protein-disulfide isomerase.
  
     0.518
SKA32269.1
Hypothetical protein.
  
     0.510
SKA33475.1
DGQHR domain-containing protein.
  
     0.506
Your Current Organism:
Chitinophaga eiseniae
NCBI taxonomy Id: 634771
Other names: C. eiseniae, Chitinophaga eiseniae Yasir et al. 2011, Chitinophaga sp. YC6729, DSM 22224, KACC 13774, strain YC6729
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.