Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SKA04227.1 | SKA04241.1 | SAMN04488128_102424 | SAMN04488128_102425 | DNA-binding response regulator, LytR/AlgR family. | GHKL domain-containing protein. | 0.954 |
SKA04227.1 | SKA04265.1 | SAMN04488128_102424 | SAMN04488128_102426 | DNA-binding response regulator, LytR/AlgR family. | YD repeat-containing protein. | 0.536 |
SKA04227.1 | SKA04283.1 | SAMN04488128_102424 | SAMN04488128_102427 | DNA-binding response regulator, LytR/AlgR family. | Rhomboid family protein. | 0.448 |
SKA04241.1 | SKA04227.1 | SAMN04488128_102425 | SAMN04488128_102424 | GHKL domain-containing protein. | DNA-binding response regulator, LytR/AlgR family. | 0.954 |
SKA04241.1 | SKA04265.1 | SAMN04488128_102425 | SAMN04488128_102426 | GHKL domain-containing protein. | YD repeat-containing protein. | 0.536 |
SKA04241.1 | SKA04283.1 | SAMN04488128_102425 | SAMN04488128_102427 | GHKL domain-containing protein. | Rhomboid family protein. | 0.448 |
SKA04265.1 | SKA04227.1 | SAMN04488128_102426 | SAMN04488128_102424 | YD repeat-containing protein. | DNA-binding response regulator, LytR/AlgR family. | 0.536 |
SKA04265.1 | SKA04241.1 | SAMN04488128_102426 | SAMN04488128_102425 | YD repeat-containing protein. | GHKL domain-containing protein. | 0.536 |
SKA04265.1 | SKA04283.1 | SAMN04488128_102426 | SAMN04488128_102427 | YD repeat-containing protein. | Rhomboid family protein. | 0.634 |
SKA04265.1 | SKA04294.1 | SAMN04488128_102426 | SAMN04488128_102428 | YD repeat-containing protein. | SusD family protein. | 0.454 |
SKA04265.1 | SKA04332.1 | SAMN04488128_102426 | SAMN04488128_102429 | YD repeat-containing protein. | TonB-linked outer membrane protein, SusC/RagA family. | 0.433 |
SKA04283.1 | SKA04227.1 | SAMN04488128_102427 | SAMN04488128_102424 | Rhomboid family protein. | DNA-binding response regulator, LytR/AlgR family. | 0.448 |
SKA04283.1 | SKA04241.1 | SAMN04488128_102427 | SAMN04488128_102425 | Rhomboid family protein. | GHKL domain-containing protein. | 0.448 |
SKA04283.1 | SKA04265.1 | SAMN04488128_102427 | SAMN04488128_102426 | Rhomboid family protein. | YD repeat-containing protein. | 0.634 |
SKA04283.1 | SKA04294.1 | SAMN04488128_102427 | SAMN04488128_102428 | Rhomboid family protein. | SusD family protein. | 0.543 |
SKA04283.1 | SKA04332.1 | SAMN04488128_102427 | SAMN04488128_102429 | Rhomboid family protein. | TonB-linked outer membrane protein, SusC/RagA family. | 0.517 |
SKA04294.1 | SKA04265.1 | SAMN04488128_102428 | SAMN04488128_102426 | SusD family protein. | YD repeat-containing protein. | 0.454 |
SKA04294.1 | SKA04283.1 | SAMN04488128_102428 | SAMN04488128_102427 | SusD family protein. | Rhomboid family protein. | 0.543 |
SKA04294.1 | SKA04332.1 | SAMN04488128_102428 | SAMN04488128_102429 | SusD family protein. | TonB-linked outer membrane protein, SusC/RagA family. | 0.959 |
SKA04332.1 | SKA04265.1 | SAMN04488128_102429 | SAMN04488128_102426 | TonB-linked outer membrane protein, SusC/RagA family. | YD repeat-containing protein. | 0.433 |
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