Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SKA08803.1 | SKA08818.1 | SAMN04488128_102677 | SAMN04488128_102678 | ApaG protein. | Hypothetical protein. | 0.555 |
SKA08803.1 | SKA08829.1 | SAMN04488128_102677 | SAMN04488128_102679 | ApaG protein. | Hypothetical protein. | 0.451 |
SKA08803.1 | SKA08843.1 | SAMN04488128_102677 | SAMN04488128_102680 | ApaG protein. | Polyisoprenoid-binding protein YceI. | 0.408 |
SKA08803.1 | SKA43831.1 | SAMN04488128_102677 | SAMN04488128_106265 | ApaG protein. | Polynucleotide kinase-phosphatase. | 0.863 |
SKA08803.1 | rsmA | SAMN04488128_102677 | SAMN04488128_1021719 | ApaG protein. | Dimethyladenosine transferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits. | 0.846 |
SKA08818.1 | SKA08803.1 | SAMN04488128_102678 | SAMN04488128_102677 | Hypothetical protein. | ApaG protein. | 0.555 |
SKA08818.1 | SKA08829.1 | SAMN04488128_102678 | SAMN04488128_102679 | Hypothetical protein. | Hypothetical protein. | 0.618 |
SKA08818.1 | SKA08843.1 | SAMN04488128_102678 | SAMN04488128_102680 | Hypothetical protein. | Polyisoprenoid-binding protein YceI. | 0.554 |
SKA08829.1 | SKA08803.1 | SAMN04488128_102679 | SAMN04488128_102677 | Hypothetical protein. | ApaG protein. | 0.451 |
SKA08829.1 | SKA08818.1 | SAMN04488128_102679 | SAMN04488128_102678 | Hypothetical protein. | Hypothetical protein. | 0.618 |
SKA08829.1 | SKA08843.1 | SAMN04488128_102679 | SAMN04488128_102680 | Hypothetical protein. | Polyisoprenoid-binding protein YceI. | 0.935 |
SKA08843.1 | SKA08803.1 | SAMN04488128_102680 | SAMN04488128_102677 | Polyisoprenoid-binding protein YceI. | ApaG protein. | 0.408 |
SKA08843.1 | SKA08818.1 | SAMN04488128_102680 | SAMN04488128_102678 | Polyisoprenoid-binding protein YceI. | Hypothetical protein. | 0.554 |
SKA08843.1 | SKA08829.1 | SAMN04488128_102680 | SAMN04488128_102679 | Polyisoprenoid-binding protein YceI. | Hypothetical protein. | 0.935 |
SKA43831.1 | SKA08803.1 | SAMN04488128_106265 | SAMN04488128_102677 | Polynucleotide kinase-phosphatase. | ApaG protein. | 0.863 |
SKA43831.1 | rsmA | SAMN04488128_106265 | SAMN04488128_1021719 | Polynucleotide kinase-phosphatase. | Dimethyladenosine transferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits. | 0.656 |
rsmA | SKA08803.1 | SAMN04488128_1021719 | SAMN04488128_102677 | Dimethyladenosine transferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits. | ApaG protein. | 0.846 |
rsmA | SKA43831.1 | SAMN04488128_1021719 | SAMN04488128_106265 | Dimethyladenosine transferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits. | Polynucleotide kinase-phosphatase. | 0.656 |