STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKA32326.1Hypothetical protein. (328 aa)    
Predicted Functional Partners:
SKA00223.1
WD40-like Beta Propeller Repeat.
  
 
 0.950
SKA32330.1
Hypothetical protein.
       0.773
SKA21110.1
Prolyl oligopeptidase family protein.
   
 
 0.599
SJZ53060.1
Trypsin-like peptidase domain-containing protein.
    
 
 0.594
SKA11061.1
Serine protease Do.
    
 
 0.594
SKA30473.1
Trypsin-like peptidase domain-containing protein.
    
 
 0.594
SKA31087.1
Serine protease, S1-C subfamily, contains C-terminal PDZ domain.
    
 
 0.594
SKA32207.1
Right handed beta helix region.
    
 
 0.594
SKA41887.1
Do/DeqQ family serine protease.
    
 
 0.594
SJZ70026.1
Hypothetical protein.
    
 
 0.584
Your Current Organism:
Chitinophaga eiseniae
NCBI taxonomy Id: 634771
Other names: C. eiseniae, Chitinophaga eiseniae Yasir et al. 2011, Chitinophaga sp. YC6729, DSM 22224, KACC 13774, strain YC6729
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.