STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKA33346.1Uncharacterized membrane protein. (546 aa)    
Predicted Functional Partners:
SKA33307.1
HlyD family secretion protein.
 
     0.847
SKA33310.1
ATP-binding cassette, subfamily B.
 
     0.820
SJZ78374.1
Hypothetical protein.
 
     0.739
SJZ86476.1
ATP-binding cassette, subfamily B.
 
     0.711
SJZ86493.1
HlyD family secretion protein.
 
     0.709
SJZ78329.1
ATP-binding cassette, subfamily B.
 
     0.696
SJZ65358.1
ATP-binding cassette, subfamily B.
 
     0.662
SJZ95988.1
Hypothetical protein.
  
     0.588
SKA02174.1
Thiol:disulfide interchange protein DsbD.
  
 
 0.566
SKA02187.1
Disulphide bond corrector protein DsbC.
  
 
 0.566
Your Current Organism:
Chitinophaga eiseniae
NCBI taxonomy Id: 634771
Other names: C. eiseniae, Chitinophaga eiseniae Yasir et al. 2011, Chitinophaga sp. YC6729, DSM 22224, KACC 13774, strain YC6729
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.