STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKA42730.1Phage Tail Collar Domain. (194 aa)    
Predicted Functional Partners:
SKA42737.1
Hypothetical protein.
       0.773
SKA42726.1
Hypothetical protein.
       0.727
SKA29790.1
Phage head-tail adaptor, putative, SPP1 family.
  
   0.567
SKA29907.1
Phage portal protein, HK97 family.
  
   0.564
SKA29806.1
Phage major capsid protein, HK97 family.
   
   0.563
SKA42742.1
Hypothetical protein.
       0.551
SJZ50519.1
Beta-glucosidase.
   
   0.501
SKA41628.1
Hypothetical protein.
   
   0.501
SJZ96310.1
TIGR03118 family protein.
 
 
   0.490
SJZ97044.1
Lysophospholipase L1.
   
   0.453
Your Current Organism:
Chitinophaga eiseniae
NCBI taxonomy Id: 634771
Other names: C. eiseniae, Chitinophaga eiseniae Yasir et al. 2011, Chitinophaga sp. YC6729, DSM 22224, KACC 13774, strain YC6729
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.