Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SJZ82827.1 | SKA48205.1 | SAMN04488128_1011755 | SAMN04488128_11046 | Hypothetical protein. | Hypothetical protein. | 0.473 |
SKA10600.1 | SKA48205.1 | SAMN04488128_102816 | SAMN04488128_11046 | Tetratricopeptide repeat-containing protein; Belongs to the AAA ATPase family. | Hypothetical protein. | 0.444 |
SKA10600.1 | eno | SAMN04488128_102816 | SAMN04488128_1021653 | Tetratricopeptide repeat-containing protein; Belongs to the AAA ATPase family. | Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family. | 0.416 |
SKA30454.1 | SKA48205.1 | SAMN04488128_103299 | SAMN04488128_11046 | ATPase family associated with various cellular activities (AAA). | Hypothetical protein. | 0.444 |
SKA30454.1 | eno | SAMN04488128_103299 | SAMN04488128_1021653 | ATPase family associated with various cellular activities (AAA). | Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family. | 0.505 |
SKA48202.1 | SKA48203.1 | SAMN04488128_11043 | SAMN04488128_11044 | Tetratricopeptide repeat-containing protein. | Electron transfer flavoprotein beta subunit. | 0.581 |
SKA48202.1 | SKA48204.1 | SAMN04488128_11043 | SAMN04488128_11045 | Tetratricopeptide repeat-containing protein. | Electron transfer flavoprotein alpha subunit apoprotein. | 0.496 |
SKA48202.1 | SKA48205.1 | SAMN04488128_11043 | SAMN04488128_11046 | Tetratricopeptide repeat-containing protein. | Hypothetical protein. | 0.455 |
SKA48203.1 | SKA48202.1 | SAMN04488128_11044 | SAMN04488128_11043 | Electron transfer flavoprotein beta subunit. | Tetratricopeptide repeat-containing protein. | 0.581 |
SKA48203.1 | SKA48204.1 | SAMN04488128_11044 | SAMN04488128_11045 | Electron transfer flavoprotein beta subunit. | Electron transfer flavoprotein alpha subunit apoprotein. | 0.999 |
SKA48203.1 | SKA48205.1 | SAMN04488128_11044 | SAMN04488128_11046 | Electron transfer flavoprotein beta subunit. | Hypothetical protein. | 0.475 |
SKA48204.1 | SKA48202.1 | SAMN04488128_11045 | SAMN04488128_11043 | Electron transfer flavoprotein alpha subunit apoprotein. | Tetratricopeptide repeat-containing protein. | 0.496 |
SKA48204.1 | SKA48203.1 | SAMN04488128_11045 | SAMN04488128_11044 | Electron transfer flavoprotein alpha subunit apoprotein. | Electron transfer flavoprotein beta subunit. | 0.999 |
SKA48204.1 | SKA48205.1 | SAMN04488128_11045 | SAMN04488128_11046 | Electron transfer flavoprotein alpha subunit apoprotein. | Hypothetical protein. | 0.548 |
SKA48204.1 | ispE | SAMN04488128_11045 | SAMN04488128_11047 | Electron transfer flavoprotein alpha subunit apoprotein. | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol. | 0.416 |
SKA48205.1 | SJZ82827.1 | SAMN04488128_11046 | SAMN04488128_1011755 | Hypothetical protein. | Hypothetical protein. | 0.473 |
SKA48205.1 | SKA10600.1 | SAMN04488128_11046 | SAMN04488128_102816 | Hypothetical protein. | Tetratricopeptide repeat-containing protein; Belongs to the AAA ATPase family. | 0.444 |
SKA48205.1 | SKA30454.1 | SAMN04488128_11046 | SAMN04488128_103299 | Hypothetical protein. | ATPase family associated with various cellular activities (AAA). | 0.444 |
SKA48205.1 | SKA48202.1 | SAMN04488128_11046 | SAMN04488128_11043 | Hypothetical protein. | Tetratricopeptide repeat-containing protein. | 0.455 |
SKA48205.1 | SKA48203.1 | SAMN04488128_11046 | SAMN04488128_11044 | Hypothetical protein. | Electron transfer flavoprotein beta subunit. | 0.475 |
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