STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKA48435.1ABC-2 type transport system permease protein. (332 aa)    
Predicted Functional Partners:
SKA48434.1
ABC-2 type transport system ATP-binding protein.
 
 0.980
SKA48431.1
NPCBM-associated, NEW3 domain of alpha-galactosidase.
 
    0.964
SJZ63861.1
Copper chaperone NosL.
  
 
 0.764
SJZ63875.1
Copper chaperone NosL.
  
 
 0.678
SJZ63889.1
Nitrous-oxide reductase.
  
 
 0.665
SJZ63821.1
Nitrous oxidase accessory protein.
  
 
 0.660
SKA32544.1
Parallel beta-helix repeat-containing protein.
  
 
 0.660
SJZ65657.1
ABC-2 type transport system ATP-binding protein.
 
  0.640
SKA41596.1
ABC-2 type transport system ATP-binding protein.
 
  0.639
SJZ63799.1
Cu-processing system ATP-binding protein.
  
 0.602
Your Current Organism:
Chitinophaga eiseniae
NCBI taxonomy Id: 634771
Other names: C. eiseniae, Chitinophaga eiseniae Yasir et al. 2011, Chitinophaga sp. YC6729, DSM 22224, KACC 13774, strain YC6729
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.