STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
kptARNA 2'-phosphotransferase, Tpt1/KptA family; Removes the 2'-phosphate from RNA via an intermediate in which the phosphate is ADP-ribosylated by NAD followed by a presumed transesterification to release the RNA and generate ADP-ribose 1''-2''- cyclic phosphate (APPR>P). May function as an ADP-ribosylase. (186 aa)    
Predicted Functional Partners:
EEX74524.1
Hypothetical protein; KEGG: eci:UTI89_C2389 3.2e-16 hypothetical protein K01971.
  
     0.646
EEX75667.1
Oxidoreductase, NAD-binding domain protein; KEGG: lpl:lp_2604 4.7e-70 oxidoreductase.
       0.588
EEX75169.1
Ser/Thr phosphatase family protein; KEGG: fnu:FN1603 4.9e-178 2',3'-cyclic nucleotide 3'-phosphodiesterase K01121; Psort location: Cytoplasmic, score: 8.96.
 
     0.559
EEX75665.1
Hypothetical protein; KEGG: ctc:CTC00579 0.00012 sbcC; exonuclease sbcC K03546; Psort location: Cytoplasmic, score: 8.96.
       0.527
EEX75487.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
 
     0.494
EEX74970.1
KEGG: pfa:PFB0150c 2.0e-05 protein kinase, putative K00870; Psort location: Cytoplasmic, score: 8.96.
  
    0.447
EEX75110.1
Hypothetical protein; KEGG: fnu:FN0522 1.9e-08 exonuclease SBCC K03546; Psort location: OuterMembrane, score: 9.49.
  
     0.424
EEX74689.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.424
EEX73974.1
Hypothetical protein.
  
     0.422
EEX73507.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.421
Your Current Organism:
Leptotrichia hofstadii
NCBI taxonomy Id: 634994
Other names: L. hofstadii F0254, Leptotrichia hofstadii F0254, Leptotrichia hofstadii str. F0254, Leptotrichia hofstadii strain F0254
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.