STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEX75199.1Hypothetical protein. (143 aa)    
Predicted Functional Partners:
EEX75200.1
ABC transporter, permease protein; KEGG: ret:RHE_PF00254 1.1e-20 glnP, glnQ; glutamine ABC transporter, ATP-binding protein K02028; Psort location: CytoplasmicMembrane, score: 10.00.
       0.427
EEX75201.1
KEGG: fnu:FN0801 1.8e-86 amino acid transport ATP-binding protein K02028; Psort location: Cytoplasmic, score: 9.12.
       0.427
Your Current Organism:
Leptotrichia hofstadii
NCBI taxonomy Id: 634994
Other names: L. hofstadii F0254, Leptotrichia hofstadii F0254, Leptotrichia hofstadii str. F0254, Leptotrichia hofstadii strain F0254
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