STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEX74592.1MATE domain protein; Psort location: CytoplasmicMembrane, score: 10.00. (258 aa)    
Predicted Functional Partners:
EEX74591.1
MATE domain protein; Psort location: CytoplasmicMembrane, score: 9.46.
     0.993
EEX74820.1
MATE efflux family protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.729
EEX73427.1
MATE domain protein; Psort location: CytoplasmicMembrane, score: 9.46.
  
     0.718
EEX73965.1
MATE efflux family protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.716
EEX73880.1
MATE efflux family protein; KEGG: mba:Mbar_A0186 0.0068 inorganic pyrophosphatase K01507; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.618
EEX75345.1
MATE efflux family protein; KEGG: wbr:WGLp473 0.00091 bacA; undecaprenyl-diphosphatase K06153; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.591
EEX73451.1
KEGG: hpa:HPAG1_0993 5.8e-65 ribosomal protein S1 K03527.
  
    0.455
Your Current Organism:
Leptotrichia hofstadii
NCBI taxonomy Id: 634994
Other names: L. hofstadii F0254, Leptotrichia hofstadii F0254, Leptotrichia hofstadii str. F0254, Leptotrichia hofstadii strain F0254
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.