STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEX73897.1Hypothetical protein. (155 aa)    
Predicted Functional Partners:
EEX73898.1
Hypothetical protein; KEGG: afu:AF0430 3.2e-06 hemV-1; iron complex transport system ATP-binding protein K02013; Psort location: Cytoplasmic, score: 8.96.
       0.664
EEX73899.1
TIGR02646 family protein.
       0.664
hemA
glutamyl-tRNAGlu reductase domain protein; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA).
       0.598
HemC
Porphobilinogen deaminase, dipyromethane cofactor binding domain protein; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family.
       0.598
hemC
KEGG: fnu:FN0645 7.6e-31 porphobilinogen deaminase K01749; Psort location: Cytoplasmic, score: 8.96.
       0.598
cobA
KEGG: fnu:FN0644 3.4e-138 uroporphyrin-III C-methyltransferase / uroporphyrinogen-III synthase K02302:K01719.
       0.598
EEX73895.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.498
EEX73896.1
N-6 DNA Methylase; KEGG: hpy:HP1517 2.1e-19 ECO57IR; type IIS restriction enzyme R and M protein K00571; Psort location: Cytoplasmic, score: 8.96.
       0.498
Your Current Organism:
Leptotrichia hofstadii
NCBI taxonomy Id: 634994
Other names: L. hofstadii F0254, Leptotrichia hofstadii F0254, Leptotrichia hofstadii str. F0254, Leptotrichia hofstadii strain F0254
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