STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADG81038.1KEGG: ttr:Tter_2677 DNA binding domain protein, excisionase family; TIGRFAM: DNA binding domain protein, excisionase family; PFAM: regulatory protein MerR. (250 aa)    
Predicted Functional Partners:
ADG81036.1
KEGG: mch:Mchl_5727 tetrahydromethanopterin S-methyltransferase subunit H; PFAM: Tetrahydromethanopterin S-methyltransferase MtrH subunit.
 
     0.834
ADG81035.1
KEGG: mch:Mchl_5728 hypothetical protein; Belongs to the uroporphyrinogen decarboxylase family.
 
     0.833
ADG81034.1
KEGG: mch:Mchl_5697 methyltransferase MtaA/CmuA family; TIGRFAM: methyltransferase MtaA/CmuA family; PFAM: Methionine synthase B12-binding module cap domain protein; Uroporphyrinogen decarboxylase (URO-D); cobalamin B12-binding domain protein; Belongs to the uroporphyrinogen decarboxylase family.
 
     0.815
ADG81765.1
KEGG: hmo:HM1_2860 subtilisin-like protease.
  
     0.758
ADG81037.1
PFAM: HPP family protein; KEGG: dae:Dtox_3792 HPP family protein.
 
     0.608
ADG83483.1
PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: drm:Dred_0307 pyridoxamine 5'-phosphate oxidase-related, FMN-binding.
  
     0.567
ADG81764.1
KEGG: hmo:HM1_2861 ATPase, aaa family; PFAM: AAA ATPase central domain protein; SMART: AAA ATPase.
  
     0.564
ADG82117.1
PFAM: S-layer domain protein; Prenyltransferase/squalene oxidase; KEGG: pth:PTH_1483 hypothetical protein.
  
   
 0.465
ADG81039.1
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: drm:Dred_0166 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein.
       0.449
ADG83463.1
KEGG: dhd:Dhaf_3885 hypothetical protein; Belongs to the uroporphyrinogen decarboxylase family.
  
     0.429
Your Current Organism:
Thermincola potens
NCBI taxonomy Id: 635013
Other names: T. potens JR, Thermincola potens JR, Thermincola potens str. JR, Thermincola potens strain JR, Thermincola sp. JR
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.