STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADG81229.1TIGRFAM: hydrogenase (NiFe) small subunit HydA; KEGG: dau:Daud_1939 hydrogenase (NiFe) small subunit HydA; PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit. (413 aa)    
Predicted Functional Partners:
ADG81230.1
PFAM: nickel-dependent hydrogenase large subunit; KEGG: chy:CHY_1545 [Ni/Fe] hydrogenase, large subunit; Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family.
 
 0.983
ADG81231.1
KEGG: chy:CHY_1544 [Ni/Fe] hydrogenase, b-type cytochrome subunit.
 
 
 0.956
ADG81145.1
PFAM: nickel-dependent hydrogenase large subunit; KEGG: dhd:Dhaf_2742 hydrogen:quinone oxidoreductase.
 
 
 0.926
ADG81632.1
PFAM: nickel-dependent hydrogenase large subunit; KEGG: dsy:DSY1598 Hup-type Ni,Fe-hydrogenase large subunit; Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family.
 
 0.926
ADG83819.1
PFAM: nickel-dependent hydrogenase large subunit; KEGG: chy:CHY_1545 [Ni/Fe] hydrogenase, large subunit.
 
 
 0.926
ADG83817.1
KEGG: chy:CHY_1544 [Ni/Fe] hydrogenase, b-type cytochrome subunit; TIGRFAM: Ni/Fe-hydrogenase, b-type cytochrome subunit; PFAM: cytochrome B561.
 
 
 0.911
ADG81146.1
KEGG: dhd:Dhaf_2741 Ni/Fe-hydrogenase, b-type cytochrome subunit; TIGRFAM: Ni/Fe-hydrogenase, b-type cytochrome subunit; PFAM: cytochrome B561.
 
 
 0.908
ADG81147.1
KEGG: dsy:DSY1596 Ni,Fe-hydrogenase maturation factor; TIGRFAM: hydrogenase maturation protease; PFAM: peptidase M52 hydrogen uptake protein.
 
  
 0.814
ADG81633.1
KEGG: dsy:DSY1596 Ni,Fe-hydrogenase maturation factor; TIGRFAM: hydrogenase maturation protease; PFAM: peptidase M52 hydrogen uptake protein.
 
  
 0.814
ADG83786.1
Hydrogenase assembly chaperone hypC/hupF; KEGG: mth:MTH1072 hydrogenase expression/formation protein HypD; TIGRFAM: hydrogenase assembly chaperone hypC/hupF; PFAM: hydrogenase formation HypD protein; hydrogenase expression/formation protein (HUPF/HYPC).
 
 
 0.506
Your Current Organism:
Thermincola potens
NCBI taxonomy Id: 635013
Other names: T. potens JR, Thermincola potens JR, Thermincola potens str. JR, Thermincola potens strain JR, Thermincola sp. JR
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