STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADG81342.1KEGG: amt:Amet_2011 cysteine desulfurase family protein; TIGRFAM: cysteine desulfurase family protein; PFAM: aminotransferase class V. (384 aa)    
Predicted Functional Partners:
ADG82761.1
KEGG: mta:Moth_1651 nitrogen-fixing NifU-like; TIGRFAM: FeS cluster assembly scaffold protein NifU; PFAM: nitrogen-fixing NifU domain protein.
  
 0.969
ADG81456.1
KEGG: cth:Cthe_1768 NifU-like domain-containing protein.
  
 
 0.897
ADG81343.1
PFAM: Fe-S cluster domain protein; KEGG: mta:Moth_2213 putative Fe-S cluster.
 
     0.807
ADG81790.1
PFAM: SufBD protein; KEGG: cdl:CDR20291_3446 hypothetical protein.
  
 
 0.801
ADG82412.1
PFAM: Endonuclease/exonuclease/phosphatase; KEGG: amt:Amet_3039 endonuclease/exonuclease/phosphatase.
    
   0.782
ADG81789.1
KEGG: cdl:CDR20291_3447 ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase.
  
  
 0.772
ADG82615.1
KEGG: mta:Moth_0124 SirA-like; TIGRFAM: selenium metabolism protein YedF; PFAM: SirA family protein; Belongs to the sulfur carrier protein TusA family.
 
 
 
 0.705
ADG81334.1
KEGG: nmr:Nmar_1697 rhodanese domain-containing protein; PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein.
 
  
  0.645
ADG81341.1
KEGG: hypothetical protein LOC100261796; K10798 poly.
       0.601
ADG81344.1
KEGG: amt:Amet_3237 hypothetical protein.
       0.566
Your Current Organism:
Thermincola potens
NCBI taxonomy Id: 635013
Other names: T. potens JR, Thermincola potens JR, Thermincola potens str. JR, Thermincola potens strain JR, Thermincola sp. JR
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