STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADG81376.1TDP-4-keto-6-deoxy-D-glucose transaminase; KEGG: vex:VEA_001805 lipopolysaccharide biosynthesis protein RffA; TIGRFAM: TDP-4-keto-6-deoxy-D-glucose transaminase; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase. (377 aa)    
Predicted Functional Partners:
ADG83672.1
TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; Undecaprenyl-phosphate glucose phosphotransferase; KEGG: rrs:RoseRS_3578 undecaprenyl-phosphate galactose phosphotransferase; PFAM: sugar transferase.
 
  
 0.981
ADG81772.1
KEGG: pca:Pcar_2593 dTDP-glucose 4,6-dehydratase; TIGRFAM: dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
  
 
 0.965
ADG81375.1
Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.
  
  
 0.843
ADG81379.1
PFAM: glycosyl transferase family 2; KEGG: mhu:Mhun_3121 glycosyl transferase family protein.
  
 0.816
ADG81377.1
KEGG: lbl:LBL_2024 hypothetical protein.
     
 0.790
ADG82935.1
TIGRFAM: nucleotide sugar dehydrogenase; KEGG: cno:NT01CX_1527 capsular polysaccharide biosynthesis protein Cap5O, putative; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase.
 
  
 0.687
rho
Transcription termination factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template.
 
    0.681
ADG83617.1
KEGG: mta:Moth_0757 nucleotidyl transferase; PFAM: Nucleotidyl transferase; CBS domain containing protein; SMART: CBS domain containing protein.
  
 
 0.599
ADG81380.1
PFAM: protein of unknown function DUF201; KEGG: ere:EUBREC_3244 putative carbamoyl-phosphate synthase large chain.
 
     0.581
ADG81381.1
PFAM: protein of unknown function DUF6 transmembrane; KEGG: pjd:Pjdr2_0426 hypothetical protein.
 
  
 0.574
Your Current Organism:
Thermincola potens
NCBI taxonomy Id: 635013
Other names: T. potens JR, Thermincola potens JR, Thermincola potens str. JR, Thermincola potens strain JR, Thermincola sp. JR
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.