STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADG81467.1KEGG: drm:Dred_0583 SMC domain-containing protein. (1099 aa)    
Predicted Functional Partners:
ADG81465.1
KEGG: drm:Dred_0581 hypothetical protein.
 
     0.957
ADG81466.1
KEGG: drm:Dred_0582 hypothetical protein.
 
     0.957
ADG81468.1
KEGG: drm:Dred_0584 hypothetical protein.
 
     0.920
ADG81296.1
Transcriptional regulator, XRE family; KEGG: chy:CHY_1862 DNA-binding protein; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein.
  
     0.646
ADG80926.1
PFAM: aminoglycoside phosphotransferase; KEGG: pca:Pcar_0939 putative homoserine kinase type II.
  
     0.530
ADG80952.1
PFAM: aminoglycoside phosphotransferase; KEGG: pca:Pcar_0939 putative homoserine kinase type II.
  
     0.528
ADG81939.1
KEGG: nth:Nther_2518 protein of unknown function DUF955; PFAM: protein of unknown function DUF955; helix-turn-helix domain protein; SMART: helix-turn-helix domain protein.
  
     0.495
ADG81471.1
PFAM: DNA polymerase beta domain protein region; KEGG: chy:CHY_1111 nucleotidyltransferase domain-containing protein.
 
     0.486
ADG81464.1
Hypothetical protein.
       0.471
ADG81769.1
KEGG: chy:CHY_1722 PilT domain-containing protein; PFAM: PilT protein domain protein; SMART: Nucleotide binding protein PINc.
  
     0.455
Your Current Organism:
Thermincola potens
NCBI taxonomy Id: 635013
Other names: T. potens JR, Thermincola potens JR, Thermincola potens str. JR, Thermincola potens strain JR, Thermincola sp. JR
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.