STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADG81763.1KEGG: dde:Dde_2500 XRE family transcriptional regulator; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein. (70 aa)    
Predicted Functional Partners:
ADG81765.1
KEGG: hmo:HM1_2860 subtilisin-like protease.
 
   
 0.754
ADG81764.1
KEGG: hmo:HM1_2861 ATPase, aaa family; PFAM: AAA ATPase central domain protein; SMART: AAA ATPase.
 
   
 0.699
ADG83704.1
PFAM: DNA polymerase beta domain protein region; KEGG: drm:Dred_3011 DNA polymerase beta subunit.
  
     0.512
ADG81028.1
KEGG: rca:Rcas_1516 transcriptional modulator of MazE/toxin, MazF.
  
   
 0.508
ADG81939.1
KEGG: nth:Nther_2518 protein of unknown function DUF955; PFAM: protein of unknown function DUF955; helix-turn-helix domain protein; SMART: helix-turn-helix domain protein.
 
  
 0.489
ADG81768.1
Type I site-specific deoxyribonuclease, HsdR family; Subunit R is required for both nuclease and ATPase activities, but not for modification.
     
 0.478
ADG81767.1
PFAM: restriction modification system DNA specificity domain; KEGG: net:Neut_0540 restriction modification system DNA specificity subunit.
  
  
 0.451
ADG81766.1
Site-specific DNA-methyltransferase (adenine-specific); KEGG: dol:Dole_2236 N-6 DNA methylase; PFAM: N-6 DNA methylase.
  
  
 0.445
Your Current Organism:
Thermincola potens
NCBI taxonomy Id: 635013
Other names: T. potens JR, Thermincola potens JR, Thermincola potens str. JR, Thermincola potens strain JR, Thermincola sp. JR
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.