STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADG81932.1PFAM: protein of unknown function DUF45; KEGG: pmo:Pmob_1069 hypothetical protein. (224 aa)    
Predicted Functional Partners:
ADG81931.1
KEGG: dsy:DSY0674 hypothetical protein; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; Protein of unknown function DUF1998; SMART: DEAD-like helicase; helicase domain protein.
       0.522
ADG81930.1
KEGG: dsy:DSY0673 hypothetical protein; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; Protein of unknown function DUF1998; SMART: DEAD-like helicase; helicase domain protein.
       0.499
ADG81933.1
KEGG: ckr:CKR_2271 hypothetical protein.
       0.444
ADG81768.1
Type I site-specific deoxyribonuclease, HsdR family; Subunit R is required for both nuclease and ATPase activities, but not for modification.
 
   
 0.431
ADG82069.1
TIGRFAM: single-stranded-DNA-specific exonuclease RecJ; PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1; HIRAN; DEAD/DEAH box helicase domain protein; helicase domain protein; KEGG: drm:Dred_0731 single-stranded-DNA-specific exonuclease RecJ; SMART: helicase domain protein; DEAD-like helicase.
  
    0.419
Your Current Organism:
Thermincola potens
NCBI taxonomy Id: 635013
Other names: T. potens JR, Thermincola potens JR, Thermincola potens str. JR, Thermincola potens strain JR, Thermincola sp. JR
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.