STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADG81939.1KEGG: nth:Nther_2518 protein of unknown function DUF955; PFAM: protein of unknown function DUF955; helix-turn-helix domain protein; SMART: helix-turn-helix domain protein. (394 aa)    
Predicted Functional Partners:
ADG81940.1
KEGG: nth:Nther_2517 hypothetical protein.
 
  
 0.967
ADG82531.1
Transcriptional regulator, XRE family; KEGG: cth:Cthe_0552 transcriptional regulator; PFAM: Cupin 2 conserved barrel domain protein; helix-turn-helix domain protein; SMART: helix-turn-helix domain protein.
  
  
 0.653
ADG83527.1
KEGG: cce:Ccel_1468 transcriptional regulator, XRE family; PFAM: Cupin 2 conserved barrel domain protein; helix-turn-helix domain protein; SMART: helix-turn-helix domain protein.
  
  
 0.653
ADG80926.1
PFAM: aminoglycoside phosphotransferase; KEGG: pca:Pcar_0939 putative homoserine kinase type II.
  
     0.579
ADG80952.1
PFAM: aminoglycoside phosphotransferase; KEGG: pca:Pcar_0939 putative homoserine kinase type II.
  
     0.569
ADG81466.1
KEGG: drm:Dred_0582 hypothetical protein.
  
     0.568
ADG81937.1
Site-specific DNA-methyltransferase (adenine-specific); KEGG: pth:PTH_0151 adenine specific DNA methylase Mod; PFAM: DNA methylase N-4/N-6 domain protein.
       0.553
ADG81296.1
Transcriptional regulator, XRE family; KEGG: chy:CHY_1862 DNA-binding protein; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein.
 
  
 0.539
ADG83315.1
PFAM: protein of unknown function DUF324; KEGG: rrs:RoseRS_1859 hypothetical protein.
  
     0.535
ADG83313.1
KEGG: cag:Cagg_1068 hypothetical protein; PFAM: Cold-shock protein DNA-binding; protein of unknown function DUF324; SMART: Cold shock protein.
 
   
 0.516
Your Current Organism:
Thermincola potens
NCBI taxonomy Id: 635013
Other names: T. potens JR, Thermincola potens JR, Thermincola potens str. JR, Thermincola potens strain JR, Thermincola sp. JR
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.