STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADG82499.1PFAM: GerA spore germination protein; KEGG: pth:PTH_1231 spore germination protein GerA. (514 aa)    
Predicted Functional Partners:
ADG82502.1
KEGG: mta:Moth_1375 stage V sporulation protein AD; TIGRFAM: stage V sporulation protein AD; PFAM: Stage V sporulation AD family protein.
 
  
 0.965
ADG82501.1
KEGG: pth:PTH_1230 hypothetical protein; TIGRFAM: stage V sporulation protein AE; PFAM: SpoVA protein.
 
   
 0.964
ADG82503.1
KEGG: drm:Dred_1106 SpoVA protein; TIGRFAM: stage V sporulation protein AC; PFAM: SpoVA protein.
 
  
 0.957
ADG82500.1
KEGG: hmo:HM1_0323 stage V sporulation protein ae.
  
  
 0.886
ADG82505.1
RNA polymerase, sigma 28 subunit, FliA/WhiG subfamily; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
 
     0.832
gpr
Spore protease; Initiates the rapid degradation of small, acid-soluble proteins during spore germination; Belongs to the peptidase A25 family.
  
    0.776
ADG82431.1
Stage IV sporulation protein A; ATPase. Has a role at an early stage in the morphogenesis of the spore coat.
  
     0.771
ADG82539.1
SMART: PDZ/DHR/GLGF domain protein; TIGRFAM: stage IV sporulation protein B; KEGG: drm:Dred_1085 peptidase S55, SpoIVB; PFAM: peptidase S55 SpoIVB; PDZ/DHR/GLGF domain protein.
  
     0.771
ADG82994.1
RNA polymerase, sigma 28 subunit, FliA/WhiG subfamily; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
  
     0.768
ADG81076.1
KEGG: dae:Dtox_0222 sporulation protein YabP; TIGRFAM: sporulation protein YabP; PFAM: YabP family protein.
  
   
 0.763
Your Current Organism:
Thermincola potens
NCBI taxonomy Id: 635013
Other names: T. potens JR, Thermincola potens JR, Thermincola potens str. JR, Thermincola potens strain JR, Thermincola sp. JR
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.