STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADG82537.1PFAM: Thiamin pyrophosphokinase catalytic region; KEGG: dae:Dtox_2042 thiamin pyrophosphokinase catalytic region. (374 aa)    
Predicted Functional Partners:
ADG82536.1
KEGG: drm:Dred_1089 hypothetical protein.
 
  
 0.980
ADG82535.1
PFAM: glycosyl transferase family 2; KEGG: drm:Dred_1090 glycosyl transferase family protein.
 
     0.963
ADG82534.1
KEGG: drm:Dred_1091 hypothetical protein.
 
     0.953
ADG82521.1
KEGG: drm:Dred_1093 hypothetical protein.
 
     0.825
ADG82952.1
KEGG: drm:Dred_2201 hypothetical protein.
 
     0.781
ADG82955.1
KEGG: swo:Swol_0673 hypothetical protein.
 
     0.780
ADG82295.1
PFAM: metallophosphoesterase; KEGG: nth:Nther_1472 metallophosphoesterase.
  
     0.621
ADG82538.1
Sporulation transcriptional activator Spo0A; May play the central regulatory role in sporulation. It may be an element of the effector pathway responsible for the activation of sporulation genes in response to nutritional stress. Spo0A may act in concert with spo0H (a sigma factor) to control the expression of some genes that are critical to the sporulation process.
       0.540
ADG82226.1
PFAM: glycosyl transferase family 2; KEGG: sth:STH1510 glycosyltransferase involved in cell wall biogenesis.
 
     0.526
ADG82412.1
PFAM: Endonuclease/exonuclease/phosphatase; KEGG: amt:Amet_3039 endonuclease/exonuclease/phosphatase.
  
     0.526
Your Current Organism:
Thermincola potens
NCBI taxonomy Id: 635013
Other names: T. potens JR, Thermincola potens JR, Thermincola potens str. JR, Thermincola potens strain JR, Thermincola sp. JR
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.