STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADG82538.1Sporulation transcriptional activator Spo0A; May play the central regulatory role in sporulation. It may be an element of the effector pathway responsible for the activation of sporulation genes in response to nutritional stress. Spo0A may act in concert with spo0H (a sigma factor) to control the expression of some genes that are critical to the sporulation process. (256 aa)    
Predicted Functional Partners:
ADG82539.1
SMART: PDZ/DHR/GLGF domain protein; TIGRFAM: stage IV sporulation protein B; KEGG: drm:Dred_1085 peptidase S55, SpoIVB; PFAM: peptidase S55 SpoIVB; PDZ/DHR/GLGF domain protein.
   
 0.982
ADG83751.1
KEGG: pth:PTH_2840 FOG: CheY-like receiver; PFAM: response regulator receiver; SMART: response regulator receiver.
  
 
0.922
ADG81590.1
KEGG: bcy:Bcer98_3857 response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver.
  
  
 
0.919
ADG82993.1
RNA polymerase, sigma 28 subunit, FliA/WhiG subfamily; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
  
   
 0.878
ADG82431.1
Stage IV sporulation protein A; ATPase. Has a role at an early stage in the morphogenesis of the spore coat.
  
   
 0.854
ADG83716.1
TIGRFAM: sporulation transcriptional regulator SpoIIID; KEGG: dhd:Dhaf_4764 sporulation transcriptional regulator SpoIIID.
  
   
 0.851
ADG81069.1
Transcriptional regulator, AbrB family; KEGG: pth:PTH_0119 regulators of stationary/sporulation gene expression; TIGRFAM: stage V sporulation protein T; transcriptional regulator, AbrB family; PFAM: SpoVT/AbrB domain protein.
  
   
 0.843
ADG82994.1
RNA polymerase, sigma 28 subunit, FliA/WhiG subfamily; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
  
   
 0.841
ADG80988.1
Transcriptional regulator, AbrB family; KEGG: pth:PTH_0067 regulators of stationary/sporulation gene expression; TIGRFAM: transcriptional regulator, AbrB family; PFAM: SpoVT/AbrB domain protein.
  
   
 0.825
ADG82502.1
KEGG: mta:Moth_1375 stage V sporulation protein AD; TIGRFAM: stage V sporulation protein AD; PFAM: Stage V sporulation AD family protein.
  
   
 0.825
Your Current Organism:
Thermincola potens
NCBI taxonomy Id: 635013
Other names: T. potens JR, Thermincola potens JR, Thermincola potens str. JR, Thermincola potens strain JR, Thermincola sp. JR
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