STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADG82758.1KEGG: dge:Dgeo_1677 PRC-barrel domain-containing protein; manually curated; PFAM: PRC-barrel domain protein. (168 aa)    
Predicted Functional Partners:
ADG82757.1
KEGG: pth:PTH_1057 hypothetical protein.
  
    0.777
ADG82759.1
KEGG: rca:Rcas_3552 hypothetical protein.
       0.773
ADG82481.1
KEGG: amt:Amet_2646 hypothetical protein.
  
     0.726
ADG82755.1
PFAM: protein of unknown function UPF0118; KEGG: drm:Dred_0768 hypothetical protein.
       0.701
ADG82756.1
KEGG: pth:PTH_1058 hypothetical protein.
       0.660
ADG82729.1
KEGG: dae:Dtox_2403 sporulation protein YtxC; TIGRFAM: sporulation protein YtxC; PFAM: Sporulation protein YtxC.
  
     0.611
mnmA
tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34.
       0.604
ADG83431.1
PFAM: protein of unknown function UPF0180; KEGG: tpd:Teth39_1490 hypothetical protein.
  
     0.603
ADG83805.1
KEGG: pth:PTH_2889 hypothetical protein.
  
     0.601
ADG83024.1
KEGG: dae:Dtox_3358 hypothetical protein.
  
     0.587
Your Current Organism:
Thermincola potens
NCBI taxonomy Id: 635013
Other names: T. potens JR, Thermincola potens JR, Thermincola potens str. JR, Thermincola potens strain JR, Thermincola sp. JR
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.