STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tmcALProtein of unknown function DUF795; Catalyzes the formation of N(4)-acetylcytidine (ac(4)C) at the wobble position of elongator tRNA(Met), using acetate and ATP as substrates. First activates an acetate ion to form acetyladenylate (Ac- AMP) and then transfers the acetyl group to tRNA to form ac(4)C34. (415 aa)    
Predicted Functional Partners:
ADG80986.1
PFAM: Methyltransferase type 11; KEGG: amt:Amet_0090 methyltransferase small.
  
     0.754
ADG82929.1
KEGG: pth:PTH_1749 hypothetical protein; TIGRFAM: sporulation integral membrane protein YlbJ; PFAM: nucleoside recognition domain protein.
  
    0.711
polC
DNA polymerase III, alpha subunit; Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity.
  
    0.631
ADG83188.1
PFAM: Methyltransferase type 11; KEGG: dae:Dtox_1339 methyltransferase type 11.
  
    0.538
ADG81215.1
PFAM: cobalt transport protein; KEGG: cbl:CLK_2891 cobalt ABC transporter permease.
  
     0.491
ADG83350.1
TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; KEGG: tte:TTE0919 HD superfamily hydrolase; SMART: metal-dependent phosphohydrolase HD region.
 
  
 0.448
ADG82886.1
Ribosome biogenesis GTP-binding protein YlqF; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily.
 
   
 0.428
ADG82914.1
Radical SAM domain protein; KEGG: tte:TTE1468 RNA polymerase II complex ELP3 subunit; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB.
 
     0.405
Your Current Organism:
Thermincola potens
NCBI taxonomy Id: 635013
Other names: T. potens JR, Thermincola potens JR, Thermincola potens str. JR, Thermincola potens strain JR, Thermincola sp. JR
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.