Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ADG83040.1 | ADG83041.1 | TherJR_2197 | TherJR_2198 | KEGG: swo:Swol_0927 putative methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein. | KEGG: hypothetical protein. | 0.495 |
ADG83040.1 | ADG83042.1 | TherJR_2197 | TherJR_2199 | KEGG: swo:Swol_0927 putative methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein. | KEGG: chy:CHY_2100 hypothetical protein. | 0.410 |
ADG83041.1 | ADG83040.1 | TherJR_2198 | TherJR_2197 | KEGG: hypothetical protein. | KEGG: swo:Swol_0927 putative methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein. | 0.495 |
ADG83041.1 | ADG83042.1 | TherJR_2198 | TherJR_2199 | KEGG: hypothetical protein. | KEGG: chy:CHY_2100 hypothetical protein. | 0.623 |
ADG83041.1 | ADG83043.1 | TherJR_2198 | TherJR_2200 | KEGG: hypothetical protein. | Serine-type D-Ala-D-Ala carboxypeptidase; KEGG: chy:CHY_2101 D-alanyl-D-alanine carboxypeptidase; PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; Penicillin-binding protein 5 domain protein; Belongs to the peptidase S11 family. | 0.542 |
ADG83042.1 | ADG83040.1 | TherJR_2199 | TherJR_2197 | KEGG: chy:CHY_2100 hypothetical protein. | KEGG: swo:Swol_0927 putative methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein. | 0.410 |
ADG83042.1 | ADG83041.1 | TherJR_2199 | TherJR_2198 | KEGG: chy:CHY_2100 hypothetical protein. | KEGG: hypothetical protein. | 0.623 |
ADG83042.1 | ADG83043.1 | TherJR_2199 | TherJR_2200 | KEGG: chy:CHY_2100 hypothetical protein. | Serine-type D-Ala-D-Ala carboxypeptidase; KEGG: chy:CHY_2101 D-alanyl-D-alanine carboxypeptidase; PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; Penicillin-binding protein 5 domain protein; Belongs to the peptidase S11 family. | 0.668 |
ADG83043.1 | ADG83041.1 | TherJR_2200 | TherJR_2198 | Serine-type D-Ala-D-Ala carboxypeptidase; KEGG: chy:CHY_2101 D-alanyl-D-alanine carboxypeptidase; PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; Penicillin-binding protein 5 domain protein; Belongs to the peptidase S11 family. | KEGG: hypothetical protein. | 0.542 |
ADG83043.1 | ADG83042.1 | TherJR_2200 | TherJR_2199 | Serine-type D-Ala-D-Ala carboxypeptidase; KEGG: chy:CHY_2101 D-alanyl-D-alanine carboxypeptidase; PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; Penicillin-binding protein 5 domain protein; Belongs to the peptidase S11 family. | KEGG: chy:CHY_2100 hypothetical protein. | 0.668 |