STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADG83125.1PFAM: cytochrome c assembly protein; KEGG: chy:CHY_1387 putative cytochrome c-type biogenesis protein CcmF. (653 aa)    
Predicted Functional Partners:
ADG83124.1
Hypothetical protein; Possible subunit of a heme lyase.
 
  
 0.978
ADG83126.1
CcmE/CycJ protein; Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH.
 
 
 0.963
ADG83120.1
PFAM: cytochrome c-type biogenesis protein CcmB; KEGG: chy:CHY_1383 putative heme exporter protein CcmB.
 
  
 0.952
ADG83119.1
PFAM: cytochrome c assembly protein; KEGG: chy:CHY_1382 putative heme exporter protein CcmC.
 
  
 0.932
ADG83121.1
TIGRFAM: heme exporter protein CcmA; PFAM: ABC transporter related; KEGG: chy:CHY_1384 sodium ABC transporter, ATP-binding protein; SMART: AAA ATPase.
 
     0.801
ADG83122.1
KEGG: chy:CHY_1385 hypothetical protein.
       0.726
ADG83123.1
KEGG: chy:CHY_1386 hypothetical protein.
       0.726
ADG83127.1
KEGG: chy:CHY_2111 hypothetical protein.
       0.612
ADG81050.1
PFAM: Tetratricopeptide TPR_2 repeat protein; KEGG: chy:CHY_2624 TPR domain-containing protein.
  
 
 0.554
ADG81894.1
KEGG: bra:BRADO5707 hypothetical protein.
  
 
 0.554
Your Current Organism:
Thermincola potens
NCBI taxonomy Id: 635013
Other names: T. potens JR, Thermincola potens JR, Thermincola potens str. JR, Thermincola potens strain JR, Thermincola sp. JR
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.