STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADG83259.1KEGG: aoe:Clos_1250 hypothetical protein. (358 aa)    
Predicted Functional Partners:
ADG83264.1
KEGG: dae:Dtox_3072 sporulation protein YqfC; TIGRFAM: sporulation protein YqfC; PFAM: protein of unknown function DUF1429.
 
     0.760
ybeY
Protein of unknown function UPF0054; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
  
    0.754
ADG83261.1
TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase 7TM extracellular region; metal-dependent phosphohydrolase 7TM intracellular region; metal-dependent phosphohydrolase HD sub domain; KEGG: pth:PTH_0891 HD superfamily hydrolase; SMART: metal-dependent phosphohydrolase HD region.
       0.754
ADG83262.1
KEGG: dae:Dtox_3070 PhoH family protein; PFAM: PhoH family protein; K Homology, type 1, subgroup; SMART: KH domain protein.
       0.733
ADG83263.1
KEGG: dae:Dtox_3071 sporulation protein YqfD; TIGRFAM: sporulation protein YqfD; PFAM: putative stage IV sporulation YqfD.
       0.733
ADG82263.1
Cell division FtsK/SpoIIIE; KEGG: pth:PTH_1293 DNA segregation ATPase FtsK/SpoIIIE and related proteins; PFAM: cell divisionFtsK/SpoIIIE; DNA translocase ftsK gamma; SMART: AAA ATPase.
   
 
 0.665
ADG81452.1
PFAM: protein of unknown function DUF255; KEGG: drm:Dred_2853 hypothetical protein.
    
 
 0.611
era
GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.
  
  
 0.588
ADG83258.1
Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family.
       0.560
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
 
 0.504
Your Current Organism:
Thermincola potens
NCBI taxonomy Id: 635013
Other names: T. potens JR, Thermincola potens JR, Thermincola potens str. JR, Thermincola potens strain JR, Thermincola sp. JR
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