STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADG83278.1PFAM: Type II secretion system F domain; KEGG: cth:Cthe_1338 Flp pilus assembly protein TadB-like protein. (278 aa)    
Predicted Functional Partners:
ADG83277.1
PFAM: Type II secretion system F domain; KEGG: cth:Cthe_1337 type II secretion system protein.
  
 0.979
ADG83279.1
PFAM: type II secretion system protein E; KEGG: cth:Cthe_1339 type II secretion system protein E.
 
  
 0.958
ADG83280.1
KEGG: cth:Cthe_1340 hypothetical protein.
 
     0.918
ADG83272.1
PFAM: peptidase A24A prepilin type IV; KEGG: cth:Cthe_0545 prepilin peptidase CpaA.
 
  
 0.904
ADG83274.1
KEGG: gym:GYMC10_5231 hypothetical protein.
 
     0.868
ADG81269.1
PFAM: type II secretion system protein E; KEGG: bbe:BBR47_05700 hypothetical protein.
 
  
 0.854
ADG83641.1
PFAM: type II secretion system protein E; KEGG: drm:Dred_2116 type II secretion system protein E.
 
  
 0.854
ADG81680.1
PFAM: type II secretion system protein E; KEGG: sti:Sthe_0519 type II secretion system protein E.
 
  
 0.848
ADG83271.1
KEGG: cth:Cthe_1334 FHA domain-containing protein; PFAM: Forkhead-associated protein; SMART: Forkhead-associated protein.
 
     0.828
ADG83643.1
KEGG: pth:PTH_1449 flp pilus assembly protein CpaB; TIGRFAM: Flp pilus assembly protein CpaB; PFAM: SAF domain protein.
 
  
 0.811
Your Current Organism:
Thermincola potens
NCBI taxonomy Id: 635013
Other names: T. potens JR, Thermincola potens JR, Thermincola potens str. JR, Thermincola potens strain JR, Thermincola sp. JR
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.