node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ADG80898.1 | ADG83441.1 | TherJR_0002 | TherJR_2604 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | Manually curated; PFAM: helicase domain protein; SNF2-related protein; KEGG: bha:BH2817 SNF2/Rad54 family helicase; SMART: DEAD-like helicase; helicase domain protein. | 0.821 |
ADG80898.1 | polA | TherJR_0002 | TherJR_0963 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. | 0.999 |
ADG80898.1 | recA | TherJR_0002 | TherJR_1277 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | recA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.918 |
ADG80898.1 | rpoA | TherJR_0002 | TherJR_0324 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.472 |
ADG80898.1 | rpoB | TherJR_0002 | TherJR_0288 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.570 |
ADG82296.1 | ADG83441.1 | TherJR_1439 | TherJR_2604 | KEGG: hmo:HM1_2374 dead/deah box helicase; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; DbpA RNA-binding domain protein; SMART: DEAD-like helicase; helicase domain protein; Belongs to the DEAD box helicase family. | Manually curated; PFAM: helicase domain protein; SNF2-related protein; KEGG: bha:BH2817 SNF2/Rad54 family helicase; SMART: DEAD-like helicase; helicase domain protein. | 0.722 |
ADG82296.1 | ADG83633.1 | TherJR_1439 | TherJR_2801 | KEGG: hmo:HM1_2374 dead/deah box helicase; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; DbpA RNA-binding domain protein; SMART: DEAD-like helicase; helicase domain protein; Belongs to the DEAD box helicase family. | KEGG: swo:Swol_0189 flagellar protein. | 0.445 |
ADG82296.1 | polA | TherJR_1439 | TherJR_0963 | KEGG: hmo:HM1_2374 dead/deah box helicase; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; DbpA RNA-binding domain protein; SMART: DEAD-like helicase; helicase domain protein; Belongs to the DEAD box helicase family. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. | 0.447 |
ADG82296.1 | rpoA | TherJR_1439 | TherJR_0324 | KEGG: hmo:HM1_2374 dead/deah box helicase; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; DbpA RNA-binding domain protein; SMART: DEAD-like helicase; helicase domain protein; Belongs to the DEAD box helicase family. | DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.733 |
ADG82296.1 | rpoB | TherJR_1439 | TherJR_0288 | KEGG: hmo:HM1_2374 dead/deah box helicase; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; DbpA RNA-binding domain protein; SMART: DEAD-like helicase; helicase domain protein; Belongs to the DEAD box helicase family. | DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.735 |
ADG82296.1 | rpoC | TherJR_1439 | TherJR_0289 | KEGG: hmo:HM1_2374 dead/deah box helicase; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; DbpA RNA-binding domain protein; SMART: DEAD-like helicase; helicase domain protein; Belongs to the DEAD box helicase family. | DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.622 |
ADG82296.1 | rpoZ | TherJR_1439 | TherJR_1808 | KEGG: hmo:HM1_2374 dead/deah box helicase; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; DbpA RNA-binding domain protein; SMART: DEAD-like helicase; helicase domain protein; Belongs to the DEAD box helicase family. | DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.634 |
ADG82344.1 | ADG83441.1 | TherJR_1491 | TherJR_2604 | KEGG: mtp:Mthe_1405 histone deacetylase superfamily protein; PFAM: histone deacetylase superfamily. | Manually curated; PFAM: helicase domain protein; SNF2-related protein; KEGG: bha:BH2817 SNF2/Rad54 family helicase; SMART: DEAD-like helicase; helicase domain protein. | 0.745 |
ADG82344.1 | ADG83633.1 | TherJR_1491 | TherJR_2801 | KEGG: mtp:Mthe_1405 histone deacetylase superfamily protein; PFAM: histone deacetylase superfamily. | KEGG: swo:Swol_0189 flagellar protein. | 0.899 |
ADG83441.1 | ADG80898.1 | TherJR_2604 | TherJR_0002 | Manually curated; PFAM: helicase domain protein; SNF2-related protein; KEGG: bha:BH2817 SNF2/Rad54 family helicase; SMART: DEAD-like helicase; helicase domain protein. | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.821 |
ADG83441.1 | ADG82296.1 | TherJR_2604 | TherJR_1439 | Manually curated; PFAM: helicase domain protein; SNF2-related protein; KEGG: bha:BH2817 SNF2/Rad54 family helicase; SMART: DEAD-like helicase; helicase domain protein. | KEGG: hmo:HM1_2374 dead/deah box helicase; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; DbpA RNA-binding domain protein; SMART: DEAD-like helicase; helicase domain protein; Belongs to the DEAD box helicase family. | 0.722 |
ADG83441.1 | ADG82344.1 | TherJR_2604 | TherJR_1491 | Manually curated; PFAM: helicase domain protein; SNF2-related protein; KEGG: bha:BH2817 SNF2/Rad54 family helicase; SMART: DEAD-like helicase; helicase domain protein. | KEGG: mtp:Mthe_1405 histone deacetylase superfamily protein; PFAM: histone deacetylase superfamily. | 0.745 |
ADG83441.1 | ADG83633.1 | TherJR_2604 | TherJR_2801 | Manually curated; PFAM: helicase domain protein; SNF2-related protein; KEGG: bha:BH2817 SNF2/Rad54 family helicase; SMART: DEAD-like helicase; helicase domain protein. | KEGG: swo:Swol_0189 flagellar protein. | 0.701 |
ADG83441.1 | polA | TherJR_2604 | TherJR_0963 | Manually curated; PFAM: helicase domain protein; SNF2-related protein; KEGG: bha:BH2817 SNF2/Rad54 family helicase; SMART: DEAD-like helicase; helicase domain protein. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. | 0.867 |
ADG83441.1 | recA | TherJR_2604 | TherJR_1277 | Manually curated; PFAM: helicase domain protein; SNF2-related protein; KEGG: bha:BH2817 SNF2/Rad54 family helicase; SMART: DEAD-like helicase; helicase domain protein. | recA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.755 |