STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADG83647.1PFAM: Flp/Fap pilin component; KEGG: pth:PTH_1445 flp pilus assembly protein, pilin Flp. (54 aa)    
Predicted Functional Partners:
ADG83642.1
KEGG: pth:PTH_1450 response regulator; PFAM: response regulator receiver; SMART: response regulator receiver.
 
  
 0.957
ADG83643.1
KEGG: pth:PTH_1449 flp pilus assembly protein CpaB; TIGRFAM: Flp pilus assembly protein CpaB; PFAM: SAF domain protein.
 
  
 0.941
ADG83646.1
PFAM: peptidase A24A prepilin type IV; KEGG: drm:Dred_2111 peptidase A24A, prepilin type IV.
 
  
 0.940
ADG83645.1
PFAM: TadE family protein; KEGG: pth:PTH_1447 flp pilus assembly protein TadG.
 
  
 0.937
ADG83644.1
PFAM: Protein of unknown function DUF2134, membrane; KEGG: adg:Adeg_1038 protein of unknown function DUF2134, membrane.
 
  
 0.924
ADG83638.1
PFAM: protein of unknown function DUF192; KEGG: gem:GM21_3209 protein of unknown function DUF192.
 
     0.824
ADG83639.1
PFAM: Type II secretion system F domain; KEGG: drm:Dred_2118 type II secretion system protein.
 
  
 0.818
ADG83640.1
PFAM: Type II secretion system F domain; KEGG: pth:PTH_1452 flp pilus assembly protein TadC.
 
  
 0.813
ADG83272.1
PFAM: peptidase A24A prepilin type IV; KEGG: cth:Cthe_0545 prepilin peptidase CpaA.
 
  
 0.758
ADG83641.1
PFAM: type II secretion system protein E; KEGG: drm:Dred_2116 type II secretion system protein E.
 
  
 0.701
Your Current Organism:
Thermincola potens
NCBI taxonomy Id: 635013
Other names: T. potens JR, Thermincola potens JR, Thermincola potens str. JR, Thermincola potens strain JR, Thermincola sp. JR
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.