STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADG83671.1PFAM: UbiA prenyltransferase; KEGG: cth:Cthe_2690 phosphoribose diphosphate:decaprenyl-phosphate phosphoribosyltransferase. (305 aa)    
Predicted Functional Partners:
mprF-2
Conserved hypothetical protein; Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms.
   
 0.929
ADG83669.1
PFAM: protein of unknown function DUF362; KEGG: tle:Tlet_1277 hypothetical protein.
 
     0.902
ADG81687.1
KEGG: lbj:LBJ_0472 hypothetical protein.
 
  
 0.839
ADG83742.1
KEGG: cbi:CLJ_B1762 hypothetical protein.
 
  
 0.759
ADG83670.1
PFAM: ABC-1 domain protein; KEGG: nml:Namu_1592 ABC-1 domain protein.
   
 
 0.708
ADG83666.1
4-amino-4-deoxy-L-arabinose transferase-like glycosyltransferase of PMT family; KEGG: rrs:RoseRS_2959 hypothetical protein.
 
  
 0.700
ADG82632.1
Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.
     
 0.601
ADG83676.1
PFAM: O-antigen polymerase; KEGG: chl:Chy400_3514 O-antigen polymerase.
 
     0.578
ADG82833.1
PFAM: flavin reductase domain protein FMN-binding; Rubredoxin-type Fe(Cys)4 protein; KEGG: sat:SYN_02123 ferric-chelate reductase / rubredoxin.
     
 0.576
atpD
ATP synthase F1, beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits; Belongs to the ATPase alpha/beta chains family.
   
 0.565
Your Current Organism:
Thermincola potens
NCBI taxonomy Id: 635013
Other names: T. potens JR, Thermincola potens JR, Thermincola potens str. JR, Thermincola potens strain JR, Thermincola sp. JR
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.