STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADG83783.1PFAM: Radical SAM domain protein; KEGG: drm:Dred_3298 radical SAM domain-containing protein. (461 aa)    
Predicted Functional Partners:
ADG83784.1
KEGG: drm:Dred_3299 hypothetical protein.
 
 
 
 0.994
ADG82952.1
KEGG: drm:Dred_2201 hypothetical protein.
  
 
 0.749
ADG82955.1
KEGG: swo:Swol_0673 hypothetical protein.
  
 
 0.749
ADG83782.1
PFAM: short-chain dehydrogenase/reductase SDR; KEGG: chy:CHY_1186 short chain dehydrogenase/reductase family oxidoreductase.
       0.697
ADG80980.1
PFAM: Orn/Lys/Arg decarboxylase major region; Orn/Lys/Arg decarboxylase domain protein; KEGG: fnu:FN0501 arginase.
 
     0.601
ADG82351.1
PFAM: Aluminium resistance family protein; KEGG: dae:Dtox_2133 aluminium resistance family protein.
  
     0.489
ADG83141.1
PFAM: protein of unknown function DUF633; KEGG: tex:Teth514_1316 hypothetical protein.
  
     0.464
rimO
MiaB-like tRNA modifying enzyme YliG; Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12; Belongs to the methylthiotransferase family. RimO subfamily.
  
   
 0.444
ADG82777.1
Manually curated; TIGRFAM: stage V sporulation protein B; KEGG: pth:PTH_1396 membrane protein; PFAM: polysaccharide biosynthesis protein; multi antimicrobial extrusion protein MatE.
  
     0.434
ADG82930.1
KEGG: adg:Adeg_0114 hypothetical protein.
  
     0.408
Your Current Organism:
Thermincola potens
NCBI taxonomy Id: 635013
Other names: T. potens JR, Thermincola potens JR, Thermincola potens str. JR, Thermincola potens strain JR, Thermincola sp. JR
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.