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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKH88083.1Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (696 aa)    
Predicted Functional Partners:
AKH88082.1
Chondroitin lyase; Broad-specificity glycosaminoglycan lyase.
 
    0.929
AKH88081.1
Chondroitinase; Broad-specificity glycosaminoglycan lyase.
 
    0.889
AKH89792.1
Hemolysin; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.856
AKH88084.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.849
AKH88085.1
Exported sulfatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.830
AKH89793.1
Hemolysin activation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.814
AKH88455.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.790
agaC_1
PTS system N-acetylgalactosamine-specific transporter subunit IIC; Catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; protein IIA transfers a phosphoryl group to IIB which then transfers the phosphoryl group to the sugar; IIC forms the translocation channel for the sugar uptake;involved in N-acetylgalactosamine transport; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.786
AKH89355.1
Transferrin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.766
AKH88454.1
Arylsulfatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.757
Your Current Organism:
Edwardsiella tarda
NCBI taxonomy Id: 636
Other names: ATCC 15947, ATCC 23656, CIP 78.61, DSM 30052, E. tarda, Edwardsiella anguillimortifera, Edwardsiella sp. HMK1, Edwardsiella sp. PB46, LMG 2793, LMG:2793, NBRC 105688, NCCB 73021, NCTC 10396, Paracolobactrum anguillimortiferum
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