STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKH88165.1Head completion/stabilization protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (167 aa)    
Predicted Functional Partners:
AKH88159.1
Tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.973
AKH88160.1
Tail fiber protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.972
AKH88167.1
gpN; N protein; structural capsid protein; bacteriophage P2-like virions include a head and a tail; N is the major head protein; the mature capsid contains mainly the processed form of the protein N*, which lacks 31 amino acids at the N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.972
AKH88166.1
Terminase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.971
AKH88164.1
Tail protein X; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.970
AKH88157.1
Baseplate assembly protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.965
AKH88168.1
precorrin-8W decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.964
AKH88161.1
Protein lysB; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.953
AKH88150.1
Phage tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.948
AKH88147.1
Tail assembly protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.940
Your Current Organism:
Edwardsiella tarda
NCBI taxonomy Id: 636
Other names: ATCC 15947, ATCC 23656, CIP 78.61, DSM 30052, E. tarda, Edwardsiella anguillimortifera, Edwardsiella sp. HMK1, Edwardsiella sp. PB46, LMG 2793, LMG:2793, NBRC 105688, NCCB 73021, NCTC 10396, Paracolobactrum anguillimortiferum
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