STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gvpAGas vesicle protein GvpA; Gas vesicles are small, hollow, gas filled protein structures that are found in several microbial planktonic microorganisms. They allow the positioning of the organism at the favorable depth for growth. GvpA type proteins form the essential core of the structure. (73 aa)    
Predicted Functional Partners:
ACC80760.1
PFAM: Gas vesicle synthesis GvpLGvpF; KEGG: ana:all2248 gas vesicle protein.
 
   
 0.883
ACC80759.1
PFAM: gas vesicle protein GVPa; Gas vesicle K; KEGG: ana:all2249 gas vesicle protein.
 
   
 0.881
ACC80758.1
Gas vesicle protein GvpJ; Gas vesicles are small, hollow, gas filled protein structures that are found in several microbial planktonic microorganisms. They allow the positioning of the organism at the favorable depth for growth.
 
   
 0.880
ACC80757.1
KEGG: ter:Tery_2329 gas vesicle protein GvpN; TIGRFAM: gas vesicle protein GvpN; PFAM: ATPase associated with various cellular activities, AAA_3; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase.
 
   
 0.878
ACC80756.1
Gas vesicle protein G, GvpG; PFAM: Gas vesicle G; KEGG: ter:Tery_2338 gas vesicle G.
 
   
 0.857
ACC80762.1
PFAM: Gas vesicle synthesis GvpLGvpF; KEGG: ter:Tery_2340 hypothetical protein.
 
   
 0.828
ACC80761.1
PFAM: AAA ATPase, central domain protein; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; KEGG: ana:all2243 cell division control protein CDC48 homolog; Belongs to the AAA ATPase family.
 
     0.725
ACC84844.1
PFAM: FG-GAP repeat protein; KEGG: ana:all0274 hypothetical protein.
      
 0.709
ACC80751.1
TIGRFAM: arsenite-activated ATPase ArsA; PFAM: Anion-transporting ATPase; KEGG: ter:Tery_2327 arsenite-activated ATPase ArsA.
 
     0.708
ACC80764.1
Gas vesicle protein GvpC.
       0.561
Your Current Organism:
Nostoc punctiforme
NCBI taxonomy Id: 63737
Other names: N. punctiforme PCC 73102, Nostoc punctiforme ATCC 29133, Nostoc punctiforme PCC 73102, Nostoc sp. (strain ATCC 29133 / PCC 73102), Nostoc sp. ATCC 29133, Nostoc sp. PCC 73102
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