STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACC82859.1KEGG: ava:Ava_2210 hypothetical protein. (661 aa)    
Predicted Functional Partners:
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
  
 0.929
ACC82860.1
KEGG: ava:Ava_2211 hypothetical protein.
 
   
 0.922
ACC82861.1
KEGG: ava:Ava_1399 hypothetical protein.
 
    0.866
ACC84721.1
PFAM: metallophosphoesterase; KEGG: ana:alr4674 putative transcripton factor for heterocyst differentiation DevT.
  
 0.833
ACC82175.1
PFAM: metallophosphoesterase; KEGG: ava:Ava_4771 metallophosphoesterase.
  
 0.833
sbcD
Nuclease SbcCD, D subunit; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SbcD family.
  
 0.833
ACC83955.1
PFAM: metallophosphoesterase; KEGG: ava:Ava_2225 metallophosphoesterase.
  
 0.833
ACC82858.1
KEGG: ava:Ava_2209 hypothetical protein.
 
   
 0.798
ACC82849.1
PFAM: helicase domain protein; type III restriction enzyme, res subunit; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; KEGG: ana:alr4909 similar to DNA repair protein rad25.
 
  
 0.792
ACC82854.1
KEGG: ava:Ava_2205 hypothetical protein.
 
     0.785
Your Current Organism:
Nostoc punctiforme
NCBI taxonomy Id: 63737
Other names: N. punctiforme PCC 73102, Nostoc punctiforme ATCC 29133, Nostoc punctiforme PCC 73102, Nostoc sp. (strain ATCC 29133 / PCC 73102), Nostoc sp. ATCC 29133, Nostoc sp. PCC 73102
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