STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACC83057.1Transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein. (104 aa)    
Predicted Functional Partners:
ACC81182.1
PFAM: Polynucleotide kinase 3 phosphatase, central region.
  
     0.641
ACC80888.1
PFAM: protein of unknown function DUF1400; KEGG: ava:Ava_3090 protein of unknown function DUF1400.
  
     0.634
ACC81444.1
PFAM: plasmid stabilization system; KEGG: ava:Ava_4655 putative RelE protein.
 
   
 0.595
ACC83572.1
PFAM: Peptidoglycan-binding domain 1 protein; KEGG: ana:alr0669 unknown protein.
  
     0.584
ACC83056.1
Hypothetical protein.
       0.541
ACC83382.1
Multi-sensor signal transduction histidine kinase; KEGG: ava:Ava_2420 PAS/PAC sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region, ATPase domain protein; histidine kinase A domain protein; SMART: PAS domain containing protein.
  
   
 0.528
ACC83009.1
KEGG: ava:Ava_5028 hypothetical protein.
  
     0.528
ACC80137.1
PFAM: nuclease (SNase domain protein); KEGG: ava:Ava_0135 nuclease (SNase-like).
 
     0.499
ACC83474.1
KEGG: ssp:SSP0040 hypothetical protein.
  
     0.491
ACC82853.1
PFAM: protein of unknown function DUF820; KEGG: ana:alr4913 hypothetical protein.
  
     0.485
Your Current Organism:
Nostoc punctiforme
NCBI taxonomy Id: 63737
Other names: N. punctiforme PCC 73102, Nostoc punctiforme ATCC 29133, Nostoc punctiforme PCC 73102, Nostoc sp. (strain ATCC 29133 / PCC 73102), Nostoc sp. ATCC 29133, Nostoc sp. PCC 73102
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.