STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACC83607.1PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; NmrA family protein; Male sterility C-terminal domain; KEGG: ana:alr4268 putative dihydroflavonol 4-reductase. (327 aa)    
Predicted Functional Partners:
ACC83608.1
PFAM: Radical SAM domain protein; KEGG: ava:Ava_1219 radical SAM.
 
   
 0.886
ACC83604.1
KEGG: ava:Ava_1216 hypothetical protein.
 
     0.841
ACC84529.1
TIGRFAM: squalene/oxidosqualene cyclases; squalene-hopene cyclase; PFAM: Prenyltransferase/squalene oxidase; KEGG: ana:all0775 squalene-hopene-cyclase.
 
 
 0.832
ACC83606.1
PFAM: acriflavin resistance protein; KEGG: ava:Ava_1217 acriflavin resistance protein.
 
     0.800
ACC83605.1
KEGG: mca:MCA1190 hypothetical protein.
 
     0.769
ACC84530.1
PFAM: glycosyl transferase, family 2; KEGG: ava:Ava_4672 glycosyl transferase, family 2.
 
  
 0.765
rpsS
Ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.
   
  0.711
rpsN
Ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family.
   
  0.710
rpsQ
Ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.
   
  0.705
rpsL
Ribosomal protein S12/S23; With S4 and S5 plays an important role in translational accuracy.
   
 0.704
Your Current Organism:
Nostoc punctiforme
NCBI taxonomy Id: 63737
Other names: N. punctiforme PCC 73102, Nostoc punctiforme ATCC 29133, Nostoc punctiforme PCC 73102, Nostoc sp. (strain ATCC 29133 / PCC 73102), Nostoc sp. ATCC 29133, Nostoc sp. PCC 73102
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.