Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ACC80922.1 | ACC84750.1 | Npun_R2354 | Npun_F6487 | KEGG: ava:Ava_1025 nitrate transport ATP-binding subunits C and D; TIGRFAM: nitrate ABC transporter, ATPase subunits C and D; PFAM: ABC transporter related; SMART: AAA ATPase. | PFAM: NADPH-dependent FMN reductase; KEGG: syn:slr0945 hypothetical protein. | 0.491 |
ACC84748.1 | ACC84749.1 | Npun_F6485 | Npun_F6486 | TIGRFAM: arsenical-resistance protein; PFAM: Bile acid:sodium symporter; KEGG: gme:Gmet_0520 arsenical-resistance protein ACR3. | PFAM: low molecular weight phosphotyrosine protein phosphatase; KEGG: syn:slr0946 arsenate reductase. | 0.943 |
ACC84748.1 | ACC84750.1 | Npun_F6485 | Npun_F6487 | TIGRFAM: arsenical-resistance protein; PFAM: Bile acid:sodium symporter; KEGG: gme:Gmet_0520 arsenical-resistance protein ACR3. | PFAM: NADPH-dependent FMN reductase; KEGG: syn:slr0945 hypothetical protein. | 0.578 |
ACC84749.1 | ACC84748.1 | Npun_F6486 | Npun_F6485 | PFAM: low molecular weight phosphotyrosine protein phosphatase; KEGG: syn:slr0946 arsenate reductase. | TIGRFAM: arsenical-resistance protein; PFAM: Bile acid:sodium symporter; KEGG: gme:Gmet_0520 arsenical-resistance protein ACR3. | 0.943 |
ACC84749.1 | ACC84750.1 | Npun_F6486 | Npun_F6487 | PFAM: low molecular weight phosphotyrosine protein phosphatase; KEGG: syn:slr0946 arsenate reductase. | PFAM: NADPH-dependent FMN reductase; KEGG: syn:slr0945 hypothetical protein. | 0.681 |
ACC84750.1 | ACC80922.1 | Npun_F6487 | Npun_R2354 | PFAM: NADPH-dependent FMN reductase; KEGG: syn:slr0945 hypothetical protein. | KEGG: ava:Ava_1025 nitrate transport ATP-binding subunits C and D; TIGRFAM: nitrate ABC transporter, ATPase subunits C and D; PFAM: ABC transporter related; SMART: AAA ATPase. | 0.491 |
ACC84750.1 | ACC84748.1 | Npun_F6487 | Npun_F6485 | PFAM: NADPH-dependent FMN reductase; KEGG: syn:slr0945 hypothetical protein. | TIGRFAM: arsenical-resistance protein; PFAM: Bile acid:sodium symporter; KEGG: gme:Gmet_0520 arsenical-resistance protein ACR3. | 0.578 |
ACC84750.1 | ACC84749.1 | Npun_F6487 | Npun_F6486 | PFAM: NADPH-dependent FMN reductase; KEGG: syn:slr0945 hypothetical protein. | PFAM: low molecular weight phosphotyrosine protein phosphatase; KEGG: syn:slr0946 arsenate reductase. | 0.681 |