STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001550055_00285Unannotated protein. (145 aa)    
Predicted Functional Partners:
GCA_001550055_00282
Unannotated protein.
 
     0.842
GCA_001550055_00283
Unannotated protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
       0.822
GCA_001550055_00284
Unannotated protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
       0.780
GCA_001550055_01755
Unannotated protein.
    
  0.772
GCA_001550055_00286
Unannotated protein.
 
     0.738
GCA_001550055_00281
Unannotated protein.
       0.639
GCA_001550055_03612
Unannotated protein.
  
     0.578
GCA_001550055_00342
Unannotated protein.
  
     0.532
GCA_001550055_00188
Unannotated protein.
 
     0.513
GCA_001550055_00296
Unannotated protein.
 
     0.510
Your Current Organism:
Kordiimonas lacus
NCBI taxonomy Id: 637679
Other names: CGMCC 1.9109, JCM 16261, K. lacus, Kordiimonas lacus Xu et al. 2011 emend. Wu et al. 2016, Kordiimonas lacus Xu et al. 2011 emend. Yang et al. 2013, Kordiimonas sp. S3-22
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.