STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001550055_00391Unannotated protein. (171 aa)    
Predicted Functional Partners:
GCA_001550055_00390
Unannotated protein.
 
  0.998
GCA_001550055_00388
Unannotated protein; Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily.
 
 0.996
GCA_001550055_03419
Unannotated protein.
  
  0.952
alc
Unannotated protein; Belongs to the allantoicase family.
 
 
  0.941
GCA_001550055_00381
Unannotated protein.
 
 
  0.913
GCA_001550055_00385
Unannotated protein.
 
  
  0.891
GCA_001550055_00386
Unannotated protein.
 
     0.855
GCA_001550055_00387
Unannotated protein.
 
     0.848
GCA_001550055_00389
Unannotated protein.
 
     0.839
GCA_001550055_00382
Unannotated protein.
 
    0.797
Your Current Organism:
Kordiimonas lacus
NCBI taxonomy Id: 637679
Other names: CGMCC 1.9109, JCM 16261, K. lacus, Kordiimonas lacus Xu et al. 2011 emend. Wu et al. 2016, Kordiimonas lacus Xu et al. 2011 emend. Yang et al. 2013, Kordiimonas sp. S3-22
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.