STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001550055_01139Unannotated protein. (359 aa)    
Predicted Functional Partners:
GCA_001550055_01140
Unannotated protein.
       0.781
GCA_001550055_02259
Unannotated protein.
   
 0.758
GCA_001550055_01138
Unannotated protein.
       0.701
folE
Unannotated protein.
    
  0.598
GCA_001550055_01141
Unannotated protein.
       0.570
GCA_001550055_00043
Unannotated protein.
   
 
 0.562
GCA_001550055_02416
Unannotated protein; Belongs to the enoyl-CoA hydratase/isomerase family.
   
 
 0.562
GCA_001550055_00784
Unannotated protein.
 
    0.465
GCA_001550055_00892
Unannotated protein.
  
 
  0.422
GCA_001550055_01142
Unannotated protein; Belongs to the glutamate synthase family.
       0.421
Your Current Organism:
Kordiimonas lacus
NCBI taxonomy Id: 637679
Other names: CGMCC 1.9109, JCM 16261, K. lacus, Kordiimonas lacus Xu et al. 2011 emend. Wu et al. 2016, Kordiimonas lacus Xu et al. 2011 emend. Yang et al. 2013, Kordiimonas sp. S3-22
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.